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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30461115_30461793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30461115 - 30461793

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGTGTGGG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CGTGCATTTATT

Flanking Amino Acid:

ESAFEEQKLDAPLDQPEIWG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

57.6

41.4

Major BPS

76.3

0.65

67.3

39.3

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

32.9

-2

3.1

36.8

42.9

Minor BPS

47.6

-0.1

65.61

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028156

30452958 - 30463814

10857