Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30462257_30463203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30462257 - 30463203

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGGC

5'SS Class:

major

3'SS Sequence:

GCTTTGACCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TAACCCTAAATA

Flanking Amino Acid:

RTGSPLTVAPGSEQPAAEAK

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.2

39.3

Major BPS

0.3

62.3

30.4

Major PPT

69.2

0.43

0.9

62.4

38.5

Minor 5ss

28.9

-2.4

3.6

41.1

45.6

Minor BPS

59.6

0.3

1.7

67.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028156

30452958 - 30463814

10857