Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3048133_3049279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3048133 - 3049279

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAATCT

5'SS Class:

major

3'SS Sequence:

TGTACATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAACTCTTAATA

Flanking Amino Acid:

SQLLTCGRTKNSAVSHTSKA

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

70.2

34.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.1

0.63

0.9

40.5

Minor 5ss

-0.4

2.9

45.1

Minor BPS

69.1

0.6

1.2

70.8

34.8

Associated Gene:

Gene:

FRRS1

Ensembl Gene ID:

ENSAPLG00000013379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018049

3039710 - 3057568

17859

ENSAPLT00000013940

3039710 - 3056222

16513

ENSAPLT00000020540

3039710 - 3052501

12792