Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30485806_30487134_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30485806 - 30487134

Intron Length:

1329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTACTAATT

5'SS Class:

weak_major

3'SS Sequence:

TGGGGACTGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

ATCCCTTGACAT

Flanking Amino Acid:

DLADYQYLFGDEEILNAKPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.1

62.2

42.3

Major BPS

67.6

0.44

1.2

Major PPT

54.3

0.1

1.2

46.6

45.1

Minor 5ss

39.7

-1.2

3.3

54.4

43.6

Minor BPS

45.8

-0.2

1.8

61.88

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008347

30485652 - 30487313

1662