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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30493285_30493484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30493285 - 30493484

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GCTATTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAA

U12 Branch Point Sequence:

ATCTGCTTGACA

Flanking Amino Acid:

WLVQKELDCTDLMKIKRAGS

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

Major BPS

58.4

0.21

1.2

39.8

Major PPT

69.5

0.44

63.9

41.6

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

63.5

0.42

1.8

72.49

39.7

Associated Gene:

Gene:

WDR78

Ensembl Gene ID:

ENSAPLG00000008177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035836

30487493 - 30506872

19380

ENSAPLT00000008498

30489290 - 30506539

17250

ENSAPLT00000042115

30487624 - 30506872

19249