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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30498221_30499449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30498221 - 30499449

Intron Length:

1229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTCTCCTGTATT

Flanking Amino Acid:

AAYRQFPVLIDPSVTSDNAG

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

1.1

83.4

29.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

0.54

0.9

71.1

39.6

Minor 5ss

41.1

-1

2.7

53.3

43.9

Minor BPS

61.7

0.45

1.8

80.71

41.2

Associated Gene:

Gene:

WDR78

Ensembl Gene ID:

ENSAPLG00000008177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042115

30487624 - 30506872

19249

ENSAPLT00000035836

30487493 - 30506872

19380

ENSAPLT00000008498

30489290 - 30506539

17250