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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30515523_30519536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30515523 - 30519536

Intron Length:

4014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

KTPRWSCVLRPSVESSSPGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

60.5

45.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

29.7

-2.3

3.2

30.2

42.9

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

MIER1

Ensembl Gene ID:

ENSAPLG00000008492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027770

30515490 - 30540693

25204

ENSAPLT00000008837

30515201 - 30541420

26220