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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30538655_30539367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30538655 - 30539367

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTACCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

CTCTCTTTATGA

Flanking Amino Acid:

DGATSSSNQNGVSANGPGEI

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

84.6

0.86

41.2

Major PPT

72.1

0.5

0.9

66.2

34.4

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

50.5

0.01

1.9

62.09

44.9

Associated Gene:

Gene:

MIER1

Ensembl Gene ID:

ENSAPLG00000008492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026816

30515779 - 30540693

24915

ENSAPLT00000008837

30515201 - 30541420

26220

ENSAPLT00000027770

30515490 - 30540693

25204