Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30571116_30572169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30571116 - 30572169

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TGTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GACGTGTTAACC

Flanking Amino Acid:

LTYINTTYVIQLSDGTDIFC

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

84.3

0.77

0.8

77.4

36.9

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

47.3

-0.2

2.1

55.28

43.1

Associated Gene:

Gene:

IL12RB2

Ensembl Gene ID:

ENSAPLG00000008716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009078

30568532 - 30585173

16642

ENSAPLT00000032966

30568532 - 30585173

16642