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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30572349_30572537_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30572349 - 30572537

Intron Length:
189

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAATGTA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTGCCTCTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTGCCAT

U12 Branch Point Sequence:
ATTTTCTTGTTT

Flanking Amino Acid:
QPLMFMLIDIVKPHPPRLLV

Intron Amino Acid Position:
227

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88
0.9
0.9
83.9
27.1

Major BPS
47.8
-0.1
1.6
58.2
48.3

Major PPT
82
0.72
0.8
74.6
36.4

Minor 5ss
35.6
-1.6
3.4
49
47.2

Minor BPS
47.3
-0.1
3.4
80.3
35.9

Associated Gene:

Gene:
IL12RB2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30568532 - 30585173
16642

30568532 - 30585173
16642