About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30573135_30575876_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30573135 - 30575876

Intron Length:
2742

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACACAA

5'SS Class:
major

3'SS Sequence:
CTTTGACATCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
TTTTCTTTGACA

Flanking Amino Acid:
STFQTQTPEAVPTGLLDVWY

Intron Amino Acid Position:
321

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1.2
67.8
39.3

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
72.7
0.51
1
63.2
42.4

Minor 5ss
36.8
-1.5
3.1
47.7
47.7

Minor BPS
85.7
1.12
0.9
90.32
23.8

Associated Gene:

Gene:
IL12RB2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30568532 - 30585173
16642

30568532 - 30585173
16642