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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30582159_30583412_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30582159 - 30583412

Intron Length:
1254

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAATGAAG

5'SS Class:
major

3'SS Sequence:
TTCTGTATTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TTATTTAAAAAT

Flanking Amino Acid:
WGNRELVCLESAVDWLIVVL

Intron Amino Acid Position:
617

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.6
0.46
1.1
65.2
40.4

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
83.8
0.76
0.8
81.4
35

Minor 5ss
33.4
-1.9
3.2
40
40.1

Minor BPS
47.3
-0.1
1.9
70.4
40.5

Associated Gene:

Gene:
IL12RB2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30568532 - 30585173
16642

30568532 - 30585173
16642