Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30583501_30584271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30583501 - 30584271

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

GCTCCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTTTAATT

Flanking Amino Acid:

CVCSMRPARKVLYSLLSATV

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

64.1

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.4

0.59

0.9

69.2

35.8

Minor 5ss

29.5

-2.3

3.1

33.3

41.7

Minor BPS

70.5

0.72

1.2

80.41

Associated Gene:

Gene:

IL12RB2

Ensembl Gene ID:

ENSAPLG00000008716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032966

30568532 - 30585173

16642

ENSAPLT00000009078

30568532 - 30585173

16642