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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3064178_3066605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3064178 - 3066605

Intron Length:

2428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGCGC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAT

U12 Branch Point Sequence:

TTTTTTTTCCTT

Flanking Amino Acid:

LDKTLFRLEQGFELQFRLGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

54.8

39.4

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

72.2

0.5

1.7

85.6

29.1

Minor 5ss

24.3

-3

3.3

32.3

42.6

Minor BPS

43.7

-0.4

3.5

78.3

39.3

Associated Gene:

Gene:

AGL

Ensembl Gene ID:

ENSAPLG00000013474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014147

3064049 - 3095087

31039