Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30648832_30649538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30648832 - 30649538

Intron Length:

707

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCAAACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TGTCCCTCAAAC

Flanking Amino Acid:

KQQKKKDKLKV*

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.4

1.17

0.7

94.5

Major BPS

68.8

0.47

1.2

63.4

Major PPT

62.9

0.29

37.8

Minor 5ss

-2.9

41.3

45.2

Minor BPS

60.5

0.31

1.7

71.07

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002160

30648827 - 30650198

1372