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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30657216_30657764_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30657216 - 30657764

Intron Length:
549

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAATGGC

5'SS Class:
major

3'SS Sequence:
CACTGTTTCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTGAC

U12 Branch Point Sequence:
GACGGCATCACT

Flanking Amino Acid:
HKNYGEDQSNGDLGVGSGEE

Intron Amino Acid Position:
473

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1
65.6
38.7

Major BPS
63.7
0.34
1.2
57
41.8

Major PPT
75
0.56
0.9
72.1
37.6

Minor 5ss
32.5
-2
3.3
40.6
40.8

Minor BPS
39.6
-0.7
2.3
54.37
46.8

Associated Gene:

Gene:
WLS

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30657106 - 30675356
18251