Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30661349_30661703_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

30661349 - 30661703

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

CTGCGCTGCTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTCCTTTAACC

Flanking Amino Acid:

WTTEVGTELAMAFIIVAGIC

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.9

-0

1.3

46.6

44.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

63.9

0.31

60.9

40.2

Minor 5ss

91.9

1.41

28.3

Minor BPS

1.05

87.93

27.6

Associated Gene:

Gene:

WLS

Ensembl Gene ID:

ENSAPLG00000014906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015568

30657106 - 30675356

18251