Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30664899_30671924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30664899 - 30671924

Intron Length:

7026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCGC

5'SS Class:

major

3'SS Sequence:

CTTCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CGGTGTCTAACS

Flanking Amino Acid:

DIAFKMDNDLKENAEITLDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

60.8

44.4

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

85.9

0.81

0.7

80.4

24.8

Minor 5ss

35.8

-1.6

2.9

41.2

Minor BPS

47.3

-0.1

2.1

64.77

45.8

Associated Gene:

Gene:

WLS

Ensembl Gene ID:

ENSAPLG00000014906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015568

30657106 - 30675356

18251