Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3067869_3068335_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3067869 - 3068335

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

TCTTATTACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTCCTTATTA

Flanking Amino Acid:

EDRLKVAKETGYNMIHFTPL

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

65.1

40.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.1

0.52

0.9

69.1

35.8

Minor 5ss

31.1

-2.2

3.2

40.1

45.4

Minor BPS

74.4

0.76

1.5

81.77

33.5

Associated Gene:

Gene:

AGL

Ensembl Gene ID:

ENSAPLG00000013474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014147

3064049 - 3095087

31039