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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30717469_30717912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30717469 - 30717912

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTGT

5'SS Class:

major

3'SS Sequence:

TTGTGTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

CTCTGCAGCACA

Flanking Amino Acid:

AIMSAMKIPQVAVVCGSCVA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.9

42.9

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

80.9

0.7

0.9

77.9

36.6

Minor 5ss

36.7

-1.5

3.6

48.2

Minor BPS

39.4

-0.8

2.4

52.55

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015999

30712387 - 30725353

12967