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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30729357_30729644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30729357 - 30729644

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

CTTTCTGCATCT

Flanking Amino Acid:

NPDTLETIKQVDLCKYVSVN

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

79.6

0.67

0.8

70.1

36.5

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

45.9

-0.2

2.4

71.47

45.8

Associated Gene:

Gene:

RPE65

Ensembl Gene ID:

ENSAPLG00000015511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016193

30726134 - 30731710

5577