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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30745677_30746857_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
30745677 - 30746857

Intron Length:
1181

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGTAACT

5'SS Class:
major

3'SS Sequence:
CACTAATTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTCAT

U12 Branch Point Sequence:
CATTCATAAACC

Flanking Amino Acid:
VKKHELLDSLENLEKTEPDI

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.1
0.36
1.1
63.6
40.4

Major BPS
79.8
0.74
0.9
81.3
29.9

Major PPT
74.1
0.54
0.9
69.6
40

Minor 5ss
34.9
-1.7
3.3
47
43.3

Minor BPS
56.2
0.17
2
68.72
42.5

Associated Gene:

Gene:
DEPDC1

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30737417 - 30748342
10926

30737417 - 30748342
10926