Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30747009_30747637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30747009 - 30747637

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

CTATTAATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTCTAAATG

Flanking Amino Acid:

EDLEDNGVLYRFPSTSPVKP

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.61

0.9

70.1

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

62.1

0.24

1.7

67.41

40.8

Associated Gene:

Gene:

DEPDC1

Ensembl Gene ID:

ENSAPLG00000002417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020308

30737417 - 30748342

10926

ENSAPLT00000002470

30737417 - 30748342

10926