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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3075399_3076936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3075399 - 3076936

Intron Length:

1538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTTT

U12 Branch Point Sequence:

TTTCCCTTTTCT

Flanking Amino Acid:

CHSTPIHVAEYMLDTARKLR

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

Major BPS

33.3

-1

4.2

61.1

45.5

Major PPT

0.72

0.9

76.5

37.5

Minor 5ss

37.6

-1.4

3.1

48.2

47.5

Minor BPS

47.4

-0.1

3.6

86.01

39.8

Associated Gene:

Gene:

AGL

Ensembl Gene ID:

ENSAPLG00000013474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014147

3064049 - 3095087

31039