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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3078897_3078978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3078897 - 3078978

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

ATGCCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGTTTTGTAATG

Flanking Amino Acid:

QELGAKGFNQVYVDQVDEDI

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.9

77.7

33.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

74.2

0.55

0.9

66.1

40.2

Minor 5ss

29.3

-2.4

4.1

46.6

48.7

Minor BPS

49.1

-0.2

57.38

39.1

Associated Gene:

Gene:

AGL

Ensembl Gene ID:

ENSAPLG00000013474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014147

3064049 - 3095087

31039