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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30875798_30899437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

30875798 - 30899437

Intron Length:

23640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGATACT

5'SS Class:

major

3'SS Sequence:

CCTTTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

AGTTTCAAAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

71.5

38.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

89.7

0.89

0.6

87.8

22.3

Minor 5ss

-1.3

3.2

51.5

39.4

Minor BPS

46.6

-0.2

60.59

38.8

Associated Gene:

Gene:

LRRC7

Ensembl Gene ID:

ENSAPLG00000009688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043149

30875712 - 30991143

115432

ENSAPLT00000024744

30875712 - 30991143

115432

ENSAPLT00000010116

30875712 - 30988441

112730