Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3091658_3092409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3091658 - 3092409

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGACA

5'SS Class:

major

3'SS Sequence:

TAATATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGAAAAT

Flanking Amino Acid:

PFHGVTIKRHGKEETITYDE

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

39.4

Major BPS

0.65

1.5

85.7

34.9

Major PPT

0.63

0.9

74.3

40.6

Minor 5ss

32.4

-2

3.2

41.3

Minor BPS

46.7

-0.1

2.5

78.39

43.5

Associated Gene:

Gene:

AGL

Ensembl Gene ID:

ENSAPLG00000013474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014147

3064049 - 3095087

31039