Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3094183_3094746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3094183 - 3094746

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

TTTCCATTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATTATCA

Flanking Amino Acid:

VLSRHYVHLERSSWKGLPEL

Intron Amino Acid Position:

1492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

64.4

41.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

79.5

0.66

0.9

78.7

33.4

Minor 5ss

31.4

-2.1

38.9

46.2

Minor BPS

62.1

0.38

1.9

78.51

37.5

Associated Gene:

Gene:

AGL

Ensembl Gene ID:

ENSAPLG00000013474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014147

3064049 - 3095087

31039