Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30970861_30976883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30970861 - 30976883

Intron Length:

6023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTTTG

5'SS Class:

major

3'SS Sequence:

GTTTCTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

GTTTCTGCAACA

Flanking Amino Acid:

LDI*KLEG*TGPRRNRAASW

Intron Amino Acid Position:

1207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

71.4

41.2

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

71.2

0.48

66.2

39.6

Minor 5ss

49.5

-0

2.4

58.1

46.5

Minor BPS

52.9

0.09

2.2

72.25

39.9

Associated Gene:

Gene:

LRRC7

Ensembl Gene ID:

ENSAPLG00000009688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010116

30875712 - 30988441

112730