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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30972730_30976883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30972730 - 30976883

Intron Length:

4154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

GTTTCTGCAACA

Flanking Amino Acid:

TKCFKSYLYRKPRRNRAASW

Intron Amino Acid Position:

1256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

71.2

0.48

66.2

39.6

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

52.9

0.09

2.2

72.25

39.9

Associated Gene:

Gene:

LRRC7

Ensembl Gene ID:

ENSAPLG00000009688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043149

30875712 - 30991143

115432

ENSAPLT00000024744

30875712 - 30991143

115432