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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30977004_30981933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30977004 - 30981933

Intron Length:

4930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCGTTACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GTTGCGTTACCC

Flanking Amino Acid:

GTCPPTPSPRRQVATSRP*W

Intron Amino Acid Position:

1247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

65.8

0.36

0.9

37.6

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

48.5

-0.1

2.4

66.71

45.1

Associated Gene:

Gene:

LRRC7

Ensembl Gene ID:

ENSAPLG00000009688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024744

30875712 - 30991143

115432

ENSAPLT00000010116

30875712 - 30988441

112730

ENSAPLT00000043149

30875712 - 30991143

115432