Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30988425_30989469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30988425 - 30989469

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGCTTA

5'SS Class:

major

3'SS Sequence:

TGACATATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATAGATTTAATC

Flanking Amino Acid:

SRIQ*T*LFNGEQKNGAX

Intron Amino Acid Position:

1456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

71.1

37.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

65.5

0.35

57.9

41.5

Minor 5ss

43.4

-0.7

54.6

43.4

Minor BPS

54.7

0.13

1.6

62.28

37.4

Associated Gene:

Gene:

LRRC7

Ensembl Gene ID:

ENSAPLG00000009688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043149

30875712 - 30991143

115432

ENSAPLT00000024744

30875712 - 30991143

115432