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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31008725_31009806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31008725 - 31009806

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAC

U12 Branch Point Sequence:

GGTAACATAACT

Flanking Amino Acid:

PELPSCKLLKELHAGENQIE

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

56.5

0.16

1.1

34.4

Major PPT

78.2

0.64

0.8

72.3

32.5

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

52.8

0.17

1.9

73.23

42.3

Associated Gene:

Gene:

LRRC40

Ensembl Gene ID:

ENSAPLG00000009971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010419

30996926 - 31018244

21319