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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31014347_31019133_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
31014347 - 31019133

Intron Length:
4787

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGA|GTGAGTCGG

5'SS Class:
major

3'SS Sequence:
CCTTCTTTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTAAC

U12 Branch Point Sequence:
TTCCATTTAACT

Flanking Amino Acid:
KIEELRLFPPDDSPLPVSSR

Intron Amino Acid Position:
43

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.9
0.42
1.1
53.4
45.5

Major BPS
80.9
0.77
0.8
81.7
25.4

Major PPT
89.3
0.88
0.6
87.5
22.7

Minor 5ss
29.4
-2.4
2.8
28.8
36.8

Minor BPS
68.4
0.65
1.5
82.33
38.9

Associated Gene:

Gene:
SRSF11

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31014001 - 31033189
19189

31014001 - 31032119
18119