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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31019268_31023244_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
31019268 - 31023244

Intron Length:
3977

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTGAA

5'SS Class:
major

3'SS Sequence:
TATTTCTCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TGCGTTCTAATG

Flanking Amino Acid:
RALIVVPYAEGVIPDETKAL

Intron Amino Acid Position:
88

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.1
71.4
33.7

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
86.9
0.83
0.7
81.7
29.8

Minor 5ss
34.4
-1.8
2.9
40.7
45.6

Minor BPS
45.4
-0.4
1.7
47.39
40.8

Associated Gene:

Gene:
SRSF11

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31014001 - 31032119
18119

31014001 - 31033189
19189