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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31027928_31029074_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
31027928 - 31029074

Intron Length:
1147

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTTACT

5'SS Class:
major

3'SS Sequence:
GTATTATTGGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAA

U12 Branch Point Sequence:
GTGTGTTTAACT

Flanking Amino Acid:
RRRTPSSSRHRRSRSRSRRR

Intron Amino Acid Position:
242

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1.1
77.3
37.6

Major BPS
72.1
0.55
1.1
63.7
43.9

Major PPT
66.1
0.36
1.1
62.9
43

Minor 5ss
37
-1.5
3
52.4
44.2

Minor BPS
66.2
0.59
1.8
80.25
42

Associated Gene:

Gene:
SRSF11

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31014001 - 31033189
19189

31014001 - 31032119
18119