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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31029207_31029702_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
31029207 - 31029702

Intron Length:
496

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATCCTT

5'SS Class:
strong_major

3'SS Sequence:
ATTTTACTAAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAC

U12 Branch Point Sequence:
TTTTACTAAAAG

Flanking Amino Acid:
SRRSRSTSKTRDKKKEEKEK

Intron Amino Acid Position:
286

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.2
0.71
1
74.6
41.7

Major BPS
77.8
0.69
0.9
69.4
37.3

Major PPT
64.9
0.34
1.1
66
38.5

Minor 5ss
43.9
-0.7
3.2
65.5
45.6

Minor BPS
56.5
0.07
2
69.83
43

Associated Gene:

Gene:
SRSF11

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31014001 - 31033189
19189

31014001 - 31032119
18119