Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_31031562_31033111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31031562 - 31033111

Intron Length:

1550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAATGGG

5'SS Class:

major

3'SS Sequence:

TCTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATCTTTATTT

Flanking Amino Acid:

GSGDSSRESKDADGRQRNRK

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

63.2

41.7

Major BPS

100

1.24

0.5

100

Major PPT

86.4

0.82

0.7

85.4

Minor 5ss

33.2

-1.9

3.3

39.9

40.5

Minor BPS

64.2

0.52

1.6

76.15

41.3

Associated Gene:

Gene:

SRSF11

Ensembl Gene ID:

ENSAPLG00000010241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010697

31014001 - 31033189

19189