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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31066271_31068737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31066271 - 31068737

Intron Length:

2467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CTTTTTTTAAAG

Flanking Amino Acid:

TIICMDDVYGGTNRYFRQVA

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.4

1.09

0.7

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

83.5

0.75

0.9

85.6

26.4

Minor 5ss

35.1

-1.7

2.7

41.5

45.1

Minor BPS

65.7

0.35

1.5

67.62

40.4

Associated Gene:

Gene:

CTH

Ensembl Gene ID:

ENSAPLG00000010832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011296

31062216 - 31080750

18535

ENSAPLT00000031972

31059918 - 31080750

20833