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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31069566_31071667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31069566 - 31071667

Intron Length:

2102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATATCATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTCATATCA

Flanking Amino Acid:

DNTFMSAYFQRPLSLGADIC

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

100

1.24

0.5

100

Major PPT

70.8

0.47

0.9

67.2

38.6

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

0.25

1.9

74.45

36.9

Associated Gene:

Gene:

CTH

Ensembl Gene ID:

ENSAPLG00000010832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031972

31059918 - 31080750

20833

ENSAPLT00000011296

31062216 - 31080750

18535