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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31075348_31077369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31075348 - 31077369

Intron Length:

2022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

ATTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGCTTTTAATT

Flanking Amino Acid:

LGGYESLAEHPAIMTHASVP

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.3

69.2

43.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.7

Minor 5ss

37.8

-1.4

3.1

54.8

42.5

Minor BPS

63.6

0.5

1.3

72.08

39.9

Associated Gene:

Gene:

CTH

Ensembl Gene ID:

ENSAPLG00000010832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031972

31059918 - 31080750

20833

ENSAPLT00000011296

31062216 - 31080750

18535