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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31077509_31080078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31077509 - 31080078

Intron Length:

2570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

CTTCTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCCTTCTTATTG

Flanking Amino Acid:

EDLDQALKAAFPDHNALK*

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

43.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.81

0.8

81.1

29.3

Minor 5ss

41.8

-0.9

2.8

54.9

43.3

Minor BPS

55.7

0.04

1.7

57.89

44.8

Associated Gene:

Gene:

CTH

Ensembl Gene ID:

ENSAPLG00000010832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031972

31059918 - 31080750

20833

ENSAPLT00000011296

31062216 - 31080750

18535