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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31142952_31143370_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
31142952 - 31143370

Intron Length:
419

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGTCTCA

5'SS Class:
major

3'SS Sequence:
TTGAATTCTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTGAA

U12 Branch Point Sequence:
ATTTCTTGAATA

Flanking Amino Acid:
EDLSKYKLDEDEDEDDADLS

Intron Amino Acid Position:
130

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.4
0.46
1.1
61.4
40.1

Major BPS
78.4
0.71
0.9
69.4
37.7

Major PPT
77.3
0.62
0.9
74
41.2

Minor 5ss
42.8
-0.8
3.1
57
47.2

Minor BPS
71.8
0.68
1.3
78.6
31.3

Associated Gene:

Gene:
ZRANB2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31137827 - 31147668
9842

31137827 - 31150728
12902