Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_31143509_31144083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31143509 - 31144083

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TGAAATTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTGTAAGT

Flanking Amino Acid:

REESDGEYDEFGRKKKKYRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.8

0.45

66.4

44.5

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

55.8

0.26

2.2

82.56

39.6

Associated Gene:

Gene:

ZRANB2

Ensembl Gene ID:

ENSAPLG00000011345

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011824

31137827 - 31150728

12902

ENSAPLT00000011819

31137827 - 31147668

9842