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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31213609_31264849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31213609 - 31264849

Intron Length:

51241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TTTCCCTTAACC

Flanking Amino Acid:

GTTNASLPLNPPSTAQYGIT

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

72.7

38.8

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

92.7

0.96

0.6

88.4

21.2

Minor 5ss

37.9

-1.4

2.8

50.4

39.3

Minor BPS

89.2

1.21

0.9

92.56

25.2

Associated Gene:

Gene:

NEGR1

Ensembl Gene ID:

ENSAPLG00000011651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012173

31213484 - 31353102

139619