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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31264982_31265043_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31264982 - 31265043

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATATGAG

5'SS Class:

major

3'SS Sequence:

AATGGTCAACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

GCCTTCTAGACT

Flanking Amino Acid:

RCHYRGRLIYGITIKNYSTR

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

38.7

Major BPS

63.9

0.34

1.2

40.9

Major PPT

47.4

-0.1

1.2

40.1

42.5

Minor 5ss

37.6

-1.4

3.2

45.5

Minor BPS

53.1

0.18

1.7

66.72

44.5

Associated Gene:

Gene:

NEGR1

Ensembl Gene ID:

ENSAPLG00000011651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012173

31213484 - 31353102

139619