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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31265067_31265105_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

31265067 - 31265105

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAGCCTCC

5'SS Class:

weak_minor

3'SS Sequence:

TAAATTATATGAG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

CTGTGATAAATT

Flanking Amino Acid:

VLTALHLQRCHYRGRLIYGI

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.5

-0

1.2

42.6

40.1

Major BPS

70.4

0.51

67.1

39.4

Major PPT

47.8

-0.1

1.7

56.7

46.9

Minor 5ss

55.2

0.18

2.8

73.4

37.1

Minor BPS

44.9

-0.3

2.2

64.19

46.7

Associated Gene:

Gene:

NEGR1

Ensembl Gene ID:

ENSAPLG00000011651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012173

31213484 - 31353102

139619