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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31874184_31876161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31874184 - 31876161

Intron Length:

1978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TGCTTTCCAATT

Flanking Amino Acid:

LNVEGASPCYRCIIAMGLDK

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

75.1

40.7

Major BPS

71.8

0.54

1.2

32.5

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

40.1

-1.1

3.2

57.4

46.9

Minor BPS

47.1

-0.1

1.8

64.81

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012702

31860522 - 31881456

20935