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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31877895_31878312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31877895 - 31878312

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATATATTT

Flanking Amino Acid:

PNGLEQLLTKNSGGLPKPSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.81

0.8

81.2

30.8

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

49.8

0.07

77.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012702

31860522 - 31881456

20935