Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3190069_3190939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3190069 - 3190939

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTATGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTCTTTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

AGTTAGTTAATG

Flanking Amino Acid:

TCILLVYKDSKCNLRALNRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

37.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

75.4

0.57

73.4

37.1

Minor 5ss

46.9

-0.3

3.2

71.8

39.2

Minor BPS

-0.2

2.2

59.58

42.3

Associated Gene:

Gene:

SLC35A3

Ensembl Gene ID:

ENSAPLG00000014199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039062

3180158 - 3202650

22493

ENSAPLT00000014822

3187011 - 3202650

15640